quality_control

Functions to give an insight on a single Sample object probes values by calculating and printing some reference statistics.

Functions

betas_stats(samples, sample_label[, apply_mask])	Print beta values stats
detection_stats(samples, sample_label[, ...])	Print detection statistics of the given sample.
dye_bias_stats(samples, sample_label[, ...])	Print dye bias stats for Infinium type I probes
intensity_stats(samples, sample_label[, ...])	Print intensity statistics of the given sample.
nb_probes_stats(samples, sample_label[, ...])	Print probe counts per Infinium type and Probe type
type1_color_channels_stats(samples, sample_label)	Print channel switch counts for Infinium type I probes