cnv

Functions to compute the Copy Number Variation (CNV), ie detect changes in the number of copies on a particular region of the genome, and splits the genome in segments with similar CNV.

Functions

copy_number_variation(samples, sample_label)

Perform copy number variation (CNV) and copy number segmentation for a sample

get_normalization_samples(annotation)

Read from the package's data normalization samples data, depending on the array type.